MOE 2019   molecular surfaces and maps - ligand interactions - conformational searching - ligand optimization - ligand selectivity - protein alignments and superposition

 MOE 2019   pharmacophore modeling - docking - fragment-based design - scaffold replacement - R-group screening - project search - protein-ligand interaction fingerprints (PLIF)

 MOE 2019   protein engineering - protein properties - developability - hot spot analysis - antibody modeling - humanization - molecular surfaces

 MOE 2019   alignments and superposition - loop and linker modeling - homology modeling - protein docking - solubility analysis - 2D hot spot mapping - protein ligand interaction fingerprints - QSAR modeling

 MOE 2019   R-group profiles and analysis - MOEsaic - mmp analysis - descriptor calculations - conformational searching - molecular alignments - pharmacophore modeling and searching - diversity analysis

 MOE 2019   MOE databases - calculated descriptors - fingerprints - QSAR modeling - binary QSAR - similarity searching - consensus modeling

 MOE 2019   SVL - programming language - create scripts - customize MOE

 MOE 2019   MOE project - database management - specialized protein families - project data search - PLIF analysis

 PSILO 2017   macromolecular repository - display electron density - 3D query searching - pocket similarity - central repository - specialized protein databases

 MOE 2019   structure preparation - non-natural amino acids - conformational searching - distance restraints - peptide-protein docking - protein-ligand interaction fingerprints

 MOE 2019   protonate 3D - ligand docking - pharmacophore query - ligand pose analysis - surfaces and maps

 MOE 2019   homologous sequence search - sequence alignments - protein templates - homology modeling - protein geometry - homology model evaluation

 MOE 2019   hot spot analysis - identify mutation sites - optimize protein properties - predict affinity and stability - calculate protein properties

 MOE 2019   fragment tools - scaffold replacement - pharmacophore model - ligand properties

 MOE 2019   SBDD - structure preparation - SiteView - QuickPrep - 2D ligand interactions - surfaces and maps - molecule builder

 MOE 2019   protein and ligand preparation - active site visualization - 2D ligand interactions diagrams - molecular surfaces - rendering options

 MOE 2019   structural search - sequence independent search - domain motif - similar stuctural motif - nuclear receptor family

 MOE 2019   building polysaccharides - oligosaccharides - carbohydrates - anomeric center - structure minimization

 MOE 2019   conformational search - loop sampling - tethered restraints - LowModeMD - shape descriptors

 MOE 2019   molecular transformations - reactions - active site constraints - modification in the receptor pocket